STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49792.1DSBA oxidoreductase; COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: rmu:RMDY18_09110 predicted dithiol-disulfide isomerase involved in polyketide biosynthesis; PFAM: DSBA oxidoreductase; SPTR: Protein disulfide isomerase (S-S rearrangase); PFAM: DSBA-like thioredoxin domain. (241 aa)    
Predicted Functional Partners:
ADU49793.1
KEGG: gbr:Gbro_3252 hypothetical protein; SPTR: Phosphoribosylglycinamide formyltransferase; PFAM: Protein of unknown function (DUF419).
  
    0.566
ADU49791.1
Uncharacterized conserved protein UCP007542; COGs: COG4425 membrane protein; InterPro IPR012037; KEGG: rop:ROP_35030 hypothetical membrane protein; PFAM: Uncharacterised conserved protein UCP007542; SPTR: Hypothetical membrane protein; PFAM: Predicted membrane protein (DUF2319).
       0.546
ADU49794.1
Hypothetical protein; COGs: COG2045 Phosphosulfolactate phosphohydrolase; KEGG: tpr:Tpau_2411 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 2-phosphosulpholactate phosphatase; Belongs to the ComB family.
       0.541
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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