STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49816.1Domain of unknown function DUF1918; InterPro IPR015057: IPR015035; KEGG: xce:Xcel_0903 hypothetical protein; PFAM: Domain of unknown function DUF1918; Domain of unknown function DUF1876; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1876); Domain of unknown function (DUF1918). (186 aa)    
Predicted Functional Partners:
ADU47000.1
KEGG: nfa:nfa23340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.572
ADU48726.1
Cna B domain protein; InterPro IPR017909: IPR008454; KEGG: mes:Meso_0048 hypothetical protein; PFAM: Cna B domain protein; SPTR: Conserved repeat domain; PFAM: Cna protein B-type domain.
  
     0.547
ADU49815.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003018: IPR011712: IPR003594; KEGG: saq:Sare_1529 GAF sensor signal transduction histidine kinase; PFAM: GAF domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; SPTR: GAF sensor signal transduction histidine kinase; PFAM: Histidine kinase; GAF domain.
  
    0.530
ADU49814.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: nca:Noca_0992 regulatory protein, LuxR; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Putative two-component system response transcriptional regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.524
ADU49746.1
Putative F420-dependent enzyme; InterPro IPR019920: IPR011576; KEGG: rha:RHA1_ro04083 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Putative uncharacterized protein; TIGRFAM: putative F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme.
  
   
 0.519
ADU48766.1
KEGG: cmi:CMM_1413 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.514
ADU46723.1
InterPro IPR006640; KEGG: nca:Noca_3805 protein of unknown function SprT; SMART: protein of unknown function SprT; SPTR: Putative uncharacterized protein; PFAM: SprT-like family.
  
     0.483
ADU48012.1
Hypothetical protein; InterPro IPR008492; KEGG: amd:AMED_7844 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PAC2 family.
   
    0.480
ADU48267.1
Hypothetical protein; InterPro IPR008492; KEGG: sco:SCO1662 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PAC2 family.
   
    0.480
ADU49951.1
KEGG: nml:Namu_5352 flavodoxin/nitric oxide synthase; SPTR: Putative uncharacterized protein.
 
     0.447
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.