STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49827.1Protein of unknown function DUF839; COGs: COG3211 phosphatase; InterProIPR022272: IPR017909: IPR006311: IPR019546: IPR 008557; KEGG: kse:Ksed_21970 predicted phosphatase; PFAM: protein of unknown function DUF839; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Putative uncharacterized protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Bacterial protein of unknown function (DUF839). (489 aa)    
Predicted Functional Partners:
ADU49828.1
KEGG: nml:Namu_3002 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.588
ADU49418.1
M6 family metalloprotease domain protein; COGs: COG4412 conserved hypothetical protein; InterPro IPR008757: IPR017683; KEGG: tbi:Tbis_2142 M6 family metalloprotease domain-containing protein; PFAM: peptidase M6 immune inhibitor A; SPTR: Putative secreted protease; TIGRFAM: M6 family metalloprotease domain protein; PFAM: Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain.
  
     0.452
ADU47048.1
InterPro IPR000169; KEGG: tcu:Tcur_1854 Flp pilus assembly protein CpaB; SPTR: Putative uncharacterized protein; TIGRFAM: Flp pilus assembly protein CpaB.
  
     0.424
ADU46746.1
Cobalt ABC transporter, inner membrane subunit CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339: IPR012809; KEGG: nca:Noca_1329 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; SPTR: Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
  
     0.408
ADU49829.1
COGs: COG4585 Signal transduction histidine kinase; InterProIPR005467: IPR004358: IPR003594: IPR017205: IPR 011712; KEGG: sco:SCO1369 two component system histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: Probable two component system histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.402
ADU49830.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: lxx:Lxx07500 two-component system, regulatory protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: LuxR family DNA-binding response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.