Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADU49833.1Membrane-flanked domain; InterPro IPR005182; KEGG: gob:Gobs_4362 membrane-flanked domain protein; PFAM: membrane-flanked domain; SPTR: Membrane-flanked domain protein; PFAM: Bacterial membrane flanked domain. (208 aa)    
Predicted Functional Partners:
ADU49866.1
Membrane-flanked domain; COGs: COG3402 conserved hypothetical protein; InterPro IPR005182: IPR018313; KEGG: ami:Amir_1064 membrane-flanked domain protein; PFAM: membrane-flanked domain; SPTR: Membrane-flanked domain protein; PFAM: Bacterial membrane flanked domain.
 
  
 0.632
ADU49834.1
COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019; KEGG: ach:Achl_0015 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I.
       0.576
ADU46640.1
Abortive infection protein; InterPro IPR003675: IPR015837; KEGG: sna:Snas_2427 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family.
  
     0.560
ADU48927.1
KEGG: bcv:Bcav_1315 hypothetical protein; SPTR: Putative ATP/GTP-binding protein.
  
    0.499
ADU48527.1
KEGG: cfl:Cfla_2099 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.446
ADU49835.1
COGs: COG2808 Transcriptional regulator; InterPro IPR018506: IPR007396: IPR011576; KEGG: cfl:Cfla_0243 FMN-binding negative transcriptional regulator; PFAM: Negative transcriptional regulator; pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Transcription antitermination factor NusB; PFAM: Putative FMN-binding domain.
       0.443
ADU48489.1
DNA polymerase III, epsilon subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR013520: IPR000305: IPR006055: IPR006054; KEGG: kra:Krad_3247 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC C subunit domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.
 
     0.426
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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