STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49838.1Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: nfa:nfa6750 hypothetical protein; SPTR: Multidrug resistance protein RomA. (373 aa)    
Predicted Functional Partners:
ADU49837.1
Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: rha:RHA1_ro05034 hypothetical protein; SPTR: Multidrug resistance protein RomA.
 
    
0.628
ADU50078.1
Metallophosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: rha:RHA1_ro00901 phosphoesterase; PFAM: metallophosphoesterase; SPTR: Possible phosphoesterase; PFAM: Calcineurin-like phosphoesterase.
 
    0.582
ADU48215.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: gob:Gobs_4179 CDP-diacylglycerol/serine O-phosphatidyl transferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.550
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
   0.486
ADU49836.1
Phosphoesterase PA-phosphatase related protein; InterPro IPR000326; KEGG: cmi:CMM_0208 putative membrane-associated phospholipid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Putative uncharacterized protein; PFAM: PAP2 superfamily.
       0.430
ADU47484.1
Putative F420-dependent enzyme; InterPro IPR019965; KEGG: rop:ROP_15660 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative F420-dependent enzyme; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv2061 family.
 
     0.401
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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