STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49848.1Putative F420-dependent enzyme; InterPro IPR019967: IPR011576; KEGG: svi:Svir_19860 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase family protein; TIGRFAM: putative F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv0121 family. (147 aa)    
Predicted Functional Partners:
ADU48267.1
Hypothetical protein; InterPro IPR008492; KEGG: sco:SCO1662 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PAC2 family.
  
    0.568
ADU48753.1
InterPro IPR011576; KEGG: kfl:Kfla_2374 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase.
  
   
 0.532
ADU48012.1
Hypothetical protein; InterPro IPR008492; KEGG: amd:AMED_7844 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PAC2 family.
   
    0.480
ADU49961.1
KEGG: nml:Namu_0371 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Luciferase-like monooxygenase.
  
   
 0.457
ADU47801.1
Hypothetical protein; InterPro IPR006311; KEGG: nca:Noca_1408 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3105).
  
     0.456
ADU47860.1
Putative F420-dependent oxidoreductase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019952: IPR016048; KEGG: bcv:Bcav_4065 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Putative uncharacterized protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family.
  
   
 0.445
ADU49000.1
KEGG: kfl:Kfla_1655 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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