STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49861.1KEGG: nca:Noca_4162 hypothetical protein; SPTR: Putative uncharacterized protein. (156 aa)    
Predicted Functional Partners:
ADU49860.1
Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: rha:RHA1_ro02740 thioesterase; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily; PFAM: Thioesterase superfamily.
       0.787
ADU49859.1
Protein of unknown function DUF1697; COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: nca:Noca_1298 hypothetical protein; PFAM: protein of unknown function DUF1697; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1697).
       0.560
ADU49858.1
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048; KEGG: nca:Noca_3005 luciferase family protein; PFAM: Luciferase-like, subgroup; SPTR: Luciferase family protein; PFAM: Luciferase-like monooxygenase.
       0.517
ADU49857.1
SNF2-related protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterProIPR007527: IPR014021: IPR001650: IPR014001: IPR 000330; KEGG: pfr:PFREUD_00710 helicase (SNF2-related protein); PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: SNF2-like; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
       0.421
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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