STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49881.1COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073: IPR000639: IPR005829; KEGG: bbe:BBR47_10850 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold. (356 aa)    
Predicted Functional Partners:
ADU48430.1
InterPro IPR000073; KEGG: gob:Gobs_4995 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase superfamily protein-like; PFAM: alpha/beta hydrolase fold.
 
     0.755
ADU49882.1
KEGG: nca:Noca_2102 hypothetical protein; SPTR: Conserved hypothetical membrane protein.
       0.645
ADU49883.1
Nitrite reductase (NO-forming); COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707: IPR001287; KEGG: nca:Noca_2101 multicopper oxidase, type 3; PFAM: multicopper oxidase type 3; PRIAM: Nitrite reductase (NO-forming); SPTR: Copper-containing nitrite reductase; PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
       0.645
ADU49880.1
Oxidoreductase molybdopterin binding protein; COGs: COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); InterPro IPR000572; KEGG: nca:Noca_0316 oxidoreductase, molybdopterin binding; PFAM: oxidoreductase molybdopterin binding; SPTR: Oxidoreductase, molybdopterin binding; PFAM: Cytochrome b(N-terminal)/b6/petB; Oxidoreductase molybdopterin binding domain.
       0.403
ADU49879.1
COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: ebi:EbC_14980 probable formate transporter; PFAM: formate/nitrite transporter; SPTR: FNT family formate-nitrite transporter; TIGRFAM: formate/nitrite transporter; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter.
       0.400
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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