STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49909.1COGs: COG4279 conserved hypothetical protein; InterPro IPR007527; KEGG: mtb:TBMG_01880 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SWIM zinc finger. (274 aa)    
Predicted Functional Partners:
ADU49908.1
SNF2-related protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR000330: IPR001650: IPR014021: IPR014001; KEGG: mtf:TBFG_12135 helicase HelZ; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Helicase helZ; manually curated; PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
    0.995
ADU49857.1
SNF2-related protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterProIPR007527: IPR014021: IPR001650: IPR014001: IPR 000330; KEGG: pfr:PFREUD_00710 helicase (SNF2-related protein); PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: SNF2-like; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
    0.660
ADU47966.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR013496; KEGG: sma:SAV_7224 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR02680.
  
     0.490
ADU47964.1
InterPro IPR013493; KEGG: sma:SAV_7222 hypothetical protein; PFAM: Conserved hypothetical protein CHP02677; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2397); TIGRFAM: conserved hypothetical protein TIGR02677.
  
     0.472
ADU49907.1
COGs: COG1289 membrane protein; KEGG: dra:DR_2205 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.465
ADU47967.1
KEGG: sma:SAV_7225 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function N-terminus (DUF3323); Protein of unknown function C-terminus (DUF2399); TIGRFAM: conserved hypothetical protein TIGR02679.
  
     0.438
ADU47965.1
InterPro IPR013494; KEGG: sma:SAV_7223 hypothetical protein; PFAM: Conserved hypothetical protein CHP02678; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2398); TIGRFAM: conserved hypothetical protein TIGR02678.
  
     0.420
ADU47405.1
RNA-directed DNA polymerase; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477: IPR013597; KEGG: rha:RHA1_ro10191 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; PRIAM: RNA-directed DNA polymerase; SPTR: RNA-directed DNA polymerase; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
  
     0.405
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.