STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49923.1Peptidoglycan-binding lysin domain; InterPro IPR018392: IPR002482; KEGG: pjd:Pjdr2_5940 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: CLV1 receptor kinase; PFAM: LysM domain. (162 aa)    
Predicted Functional Partners:
ADU46873.1
Protein of unknown function DUF1508; COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: kfl:Kfla_0634 protein of unknown function DUF1508; PFAM: protein of unknown function DUF1508; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1508).
  
   0.919
ADU47433.1
Peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR003718: IPR019904; KEGG: nca:Noca_1377 OsmC family protein; PFAM: OsmC family protein; SPTR: Putative ATP/GTP-binding protein; TIGRFAM: peroxiredoxin, OsmC subfamily; PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily.
  
  
 0.541
ADU49922.1
KEGG: kfl:Kfla_0873 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.541
ADU48112.1
KEGG: mkm:Mkms_2155 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NADPH-dependent FMN reductase.
   
  
 0.521
ADU46573.1
KEGG: kra:Krad_0008 hypothetical protein; SPTR: Putative integral membrane protein; PFAM: Transmembrane domain of unknown function (DUF3566).
   
    0.503
ADU47587.1
KEGG: bcv:Bcav_3015 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.503
ADU49924.1
KEGG: tpr:Tpau_2285 hypothetical protein; SPTR: Major facilitator superfamily permease.
       0.470
ADU49405.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.449
ADU49764.1
COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterProIPR019775: IPR019782: IPR017986: IPR001680: IPR 001867: IPR005158; KEGG: nml:Namu_2911 transcriptional regulator, SARP family; PFAM: transcriptional activator domain; transcriptional regulator domain-containing protein; SPTR: Transcriptional regulator, SARP family; PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal.
 
     0.449
ADU49925.1
KEGG: hne:HNE_2981 hypothetical protein; SPTR: Membrane protein.
       0.432
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.