Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADU49940.1KEGG: rci:RCIX660 hypothetical protein; SPTR: Excretory/secretory mucin MUC-5. (216 aa)    
Predicted Functional Partners:
ADU49941.1
CHRD domain containing protein; InterPro IPR010895; KEGG: pzu:PHZ_c0812 hypothetical protein; SMART: CHRD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: CHRD domain.
       0.510
ADU49939.1
Protein of unknown function DUF2237; COGs: COG3651 conserved hypothetical protein; InterPro IPR018714; KEGG: mjl:Mjls_5338 hypothetical protein; PFAM: Protein of unknown function DUF2237; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2237).
       0.490
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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