STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49958.1Hypothetical protein; InterPro IPR020311; KEGG: kfl:Kfla_3461 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2630). (82 aa)    
Predicted Functional Partners:
ADU49957.1
KEGG: art:Arth_4387 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.698
ADU49956.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR007630: IPR014284; KEGG: art:Arth_3789 ECF subfamily RNA polymerase sigma-24 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.620
ADU49959.1
COGs: COG0412 Dienelactone hydrolase; KEGG: art:Arth_0598 dienelactone hydrolase; SPTR: Dienelactone hydrolase; PFAM: Dienelactone hydrolase family.
       0.559
ADU47970.1
KEGG: sro:Sros_5498 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Rho termination factor, N-terminal domain; ChaB.
  
     0.527
ADU49960.1
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: rop:ROP_65980 hypothetical protein; PFAM: Patatin; SPTR: Putative uncharacterized protein; PFAM: Patatin-like phospholipase.
       0.437
ADU49636.1
KEGG: nml:Namu_1106 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.433
ADU47651.1
KEGG: sro:Sros_3874 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF419).
  
     0.423
ADU49308.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000595: IPR003594: IPR005467: IPR004358; KEGG: rha:RHA1_ro04003 sensor kinase, two-component system; PFAM: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SMART: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.406
ADU49953.1
Regulatory protein TetR; InterPro IPR001647; KEGG: nca:Noca_2173 regulatory protein, TetR; PFAM: regulatory protein TetR; SPTR: Regulatory protein, TetR; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.