STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49975.1Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: mgi:Mflv_0689 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Putative IS110 family transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase. (431 aa)    
Predicted Functional Partners:
ADU46595.1
Transposase IS116/IS110/IS902 family protein; InterPro IPR003346; KEGG: mgi:Mflv_1197 transposase, IS111A/IS1328/IS1533; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase, IS111A/IS1328/IS1533; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.482
ADU49551.1
KEGG: art:Arth_0193 CdaR family transcriptional regulator; SPTR: Transcriptional regulator, CdaR family.
  
     0.436
ADU47776.1
Polysaccharide biosynthesis protein; InterPro IPR000812: IPR002797; KEGG: cwo:Cwoe_0093 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
     0.431
ADU50106.1
KEGG: ske:Sked_37910 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.410
ADU48785.1
KEGG: art:Arth_2689 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.402
ADU48962.1
DALR anticodon binding domain protein; InterPro IPR008909; KEGG: mmi:MMAR_4105 arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; SPTR: Arginyl tRNA synthetase; PFAM: DALR anticodon binding domain.
  
     0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.