STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50028.1KEGG: art:Arth_0347 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1469). (147 aa)    
Predicted Functional Partners:
ADU50027.1
KEGG: aau:AAur_0122 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.952
ADU50029.1
KEGG: pfr:PFREUD_00910 hypothetical membrane protein; SPTR: Hypothetical membrane protein; PFAM: Protein of unknown function (DUF3618).
 
     0.952
ADU47981.1
Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR017039: IPR004664; KEGG: rop:ROP_32170 putative ribonuclease; PFAM: ribonuclease BN; SPTR: Putative ribonuclease; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
 
     0.678
ADU46990.1
KEGG: nml:Namu_2441 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
 
     0.473
ADU47047.1
KEGG: ach:Achl_4441 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.441
ADU50026.1
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873: IPR020845; KEGG: gob:Gobs_4160 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase; PFAM: AMP-binding enzyme.
       0.423
ADU47012.1
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: amd:AMED_4111 hypothetical protein; PFAM: phospholipase D/Transphosphatidylase; SPTR: Phospholipase D; PFAM: Phospholipase D Active site motif.
  
     0.416
ADU47312.1
CHAD domain containing protein; COGs: COG5607 conserved hypothetical protein; InterPro IPR008172: IPR007899; KEGG: kfl:Kfla_0605 CHAD domain containing protein; PFAM: CHAD domain containing protein; adenylate cyclase; SPTR: CHAD domain containing protein; PFAM: CYTH domain; CHAD domain.
  
     0.413
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.