STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50043.1Hypothetical protein; InterPro IPR007527; KEGG: aau:AAur_2031 SWIM zinc finger domain-containing protein; SPTR: Putative SWIM zinc finger domain protein; PFAM: SWIM zinc finger. (359 aa)    
Predicted Functional Partners:
ADU50044.1
InterPro IPR008912; KEGG: aau:AAur_2027 VWA domain CoxE-like family protein; PFAM: VWA containing CoxE family protein; SPTR: VWA domain containing CoxE-like protein family; PFAM: VWA domain containing CoxE-like protein.
 
     0.903
ADU50042.1
KEGG: sna:Snas_3241 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.492
ADU49089.1
Hypothetical protein; InterPro IPR006311; KEGG: sru:SRU_2417 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Extensin-like protein C-terminus.
  
     0.403
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.