STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50044.1InterPro IPR008912; KEGG: aau:AAur_2027 VWA domain CoxE-like family protein; PFAM: VWA containing CoxE family protein; SPTR: VWA domain containing CoxE-like protein family; PFAM: VWA domain containing CoxE-like protein. (232 aa)    
Predicted Functional Partners:
ADU50043.1
Hypothetical protein; InterPro IPR007527; KEGG: aau:AAur_2031 SWIM zinc finger domain-containing protein; SPTR: Putative SWIM zinc finger domain protein; PFAM: SWIM zinc finger.
 
     0.903
ADU48577.1
Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: pfr:PFREUD_23600 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027.
  
     0.467
ADU47337.1
Protoporphyrin IX magnesium-chelatase; COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593: IPR002035: IPR011704; KEGG: nml:Namu_0159 magnesium chelatase; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; SPTR: Magnesium chelatase; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.
  
 
 0.431
ADU49720.1
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: nca:Noca_0952 putative magnesium chelatase subunit ChlI; SPTR: Putative magnesium chelatase subunit ChlI.
  
 
 0.431
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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