STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50053.1COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651: IPR006037: IPR011761: IPR004666; KEGG: mlu:Mlut_23180 SSU ribosomal protein S6P modification protein; PFAM: RimK domain protein ATP-grasp; TrkA-C domain protein; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TrkA-C domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family. (398 aa)    
Predicted Functional Partners:
ADU50052.1
Protein of unknown function DUF785; COGs: COG4067 conserved hypothetical protein; InterPro IPR008503; KEGG: lxx:Lxx24490 hypothetical protein; PFAM: protein of unknown function DUF785; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF785).
     0.991
ADU50051.1
Succinylglutamate desuccinylase/aspartoacylase; COGs: COG3608 deacylase; InterPro IPR007036: IPR000834; KEGG: mlu:Mlut_23200 predicted deacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
 
     0.916
ADU50054.1
Rhodanese domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: nml:Namu_2578 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
     
 0.762
ADU50050.1
Amino acid-binding ACT domain protein; COGs: COG2716 Glycine cleavage system regulatory protein; InterPro IPR016867: IPR002912; KEGG: tkm:TK90_2229 amino acid-binding ACT domain protein; PFAM: amino acid-binding ACT domain protein; SPTR: Putative uncharacterized protein; PFAM: ACT domain.
 
     0.553
ADU50049.1
KEGG: bcv:Bcav_1842 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.488
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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