STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50073.1Hypothetical protein; KEGG: bcv:Bcav_3050 twin-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal; PFAM: Protein of unknown function (DUF664). (341 aa)    
Predicted Functional Partners:
ADU49962.1
KEGG: nca:Noca_0914 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.607
ADU46800.1
KEGG: fre:Franean1_6978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.560
ADU50074.1
Aminoglycoside phosphotransferase; COGs: COG2334 Putative homoserine kinase type II (protein kinase fold); InterPro IPR002575; KEGG: bmr:BMI_II1170 hypothetical protein; PFAM: aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
       0.559
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.543
ADU49065.1
Methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein; COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048: IPR004360; KEGG: cfl:Cfla_0254 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain.
  
     0.464
ADU50049.1
KEGG: bcv:Bcav_1842 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.456
ADU47479.1
HhH-GPD family protein; InterPro IPR003265: IPR017658; KEGG: sgr:SGR_3531 hypothetical protein; PFAM: HhH-GPD family protein; SPTR: HhH-GPD family protein; TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: uncharacterized HhH-GPD family protein.
  
     0.444
ADU49386.1
InterPro IPR004360; KEGG: rha:RHA1_ro03837 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein.
  
     0.408
ADU47367.1
Hypothetical protein; InterPro IPR002052; KEGG: sna:Snas_4838 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.404
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.