STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50080.1DNA alkylation repair enzyme; InterPro IPR014825; KEGG: amd:AMED_6049 putative DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: Putative uncharacterized protein; PFAM: DNA alkylation repair enzyme. (167 aa)    
Predicted Functional Partners:
ADU50081.1
MATE efflux family protein; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: pac:PPA2259 hypothetical protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Conserved membrane protein, MatE domain; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
    0.796
ADU50079.1
Hypothetical protein; InterPro IPR018201; KEGG: kfl:Kfla_0729 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pregnancy-associated plasma protein-A.
       0.527
ADU47498.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR007168: IPR003594; KEGG: art:Arth_2999 putative signal transduction histidine kinase; PFAM: PspC domain protein; ATP-binding region ATPase domain protein; SPTR: Putative signal transduction histidine kinase; PFAM: PspC domain.
 
    0.452
ADU47651.1
KEGG: sro:Sros_3874 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF419).
 
     0.436
ADU49069.1
KEGG: tbi:Tbis_1729 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.433
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.