Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADU50095.1Transcriptional regulator, PadR family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: ace:Acel_2137 PadR family transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: Transcriptional regulator, PadR family; PFAM: Transcriptional regulator PadR-like family. (221 aa)    
Predicted Functional Partners:
ADU50096.1
COGs: COG1260 Myo-inositol-1-phosphate synthase; InterPro IPR002587: IPR013021: IPR017815; KEGG: nca:Noca_4678 myo-inositol-1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; SPTR: Myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase, Actinobacterial type.
 
   
 0.899
ADU48252.1
InterPro IPR011701; KEGG: kfl:Kfla_7034 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
 
   
 0.659
ADU50093.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014325: IPR014284; KEGG: kfl:Kfla_6274 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymera [...]
  
    0.611
ADU50094.1
KEGG: kfl:Kfla_6275 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.602
ADU47218.1
InterPro IPR011701; KEGG: kfl:Kfla_5920 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Putative integral membrane protein; PFAM: Major Facilitator Superfamily.
  
     0.585
ADU50091.1
COGs: COG5650 integral membrane protein; KEGG: kra:Krad_4340 integral membrane protein; SPTR: Putative transmembrane protein; PFAM: Protein of unknown function (DUF2029).
       0.526
ADU50092.1
Peptidoglycan glycosyltransferase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264: IPR001460; KEGG: kra:Krad_4341 glycosyl transferase family 51; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative secreted penicillin-binding protein; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
       0.526
ADU48007.1
KEGG: tbi:Tbis_2449 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.482
ADU48374.1
Hypothetical protein; InterPro IPR016160; KEGG: kra:Krad_3061 hypothetical protein; SPTR: Putative secreted protein.
  
     0.466
ADU48273.1
COGs: COG2887 RecB family exonuclease; KEGG: kfl:Kfla_3207 RecB family exonuclease-like protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2800).
  
     0.441
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.