STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50101.1KEGG: mab:MAB_3781 hypothetical protein; SPTR: Putative uncharacterized protein. (243 aa)    
Predicted Functional Partners:
ADU50102.1
COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR010822: IPR001932; KEGG: ami:Amir_1685 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Protein phosphatase; PFAM: Protein phosphatase 2C.
       0.778
ADU50103.1
KEGG: msm:MSMEG_3229 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADU47504.1
InterPro IPR001343: IPR018511: IPR003995; KEGG: kfl:Kfla_0735 RTX toxins and related Ca2+-binding protein-like protein; SPTR: RTX toxins and related Ca2+-binding protein-like protein.
  
     0.610
ADU46647.1
Aminoglycoside phosphotransferase; COGs: COG0510 choline kinase involved in LPS biosynthesis; InterPro IPR002575; KEGG: scb:SCAB_38761 putative phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Putative phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.598
ADU47741.1
KEGG: bcv:Bcav_1119 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2581).
  
     0.545
ADU50100.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR014284; KEGG: amd:AMED_1362 RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
    0.533
ADU50099.1
KEGG: cai:Caci_5300 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.526
ADU50116.1
Hypothetical protein; InterPro IPR004378; KEGG: bcv:Bcav_0930 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein.
  
     0.522
ADU50104.1
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterProIPR002646: IPR006674: IPR014065: IPR006675: IPR 003607; KEGG: kse:Ksed_26890 tRNA adenylyltransferase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Putative RNA nucleotidyltransferase; TIGRFAM: tRNA adenylyltransferase; metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: tRNA adenylyltransferase; uncharac [...]
     
 0.500
ADU47651.1
KEGG: sro:Sros_3874 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF419).
  
     0.470
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.