STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50106.1KEGG: ske:Sked_37910 hypothetical protein; SPTR: Putative uncharacterized protein. (751 aa)    
Predicted Functional Partners:
ADU50107.1
KEGG: cfl:Cfla_3716 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.914
ADU50105.1
NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086: IPR020476: IPR020084; KEGG: kse:Ksed_26900 ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
  
  
 0.869
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.738
ADU48622.1
KEGG: ske:Sked_14030 hypothetical protein; SPTR: DNA primase.
  
   
 0.737
ADU49012.1
Lipoprotein LpqB, GerMN domain; InterPro IPR019606: IPR018910; KEGG: kse:Ksed_08610 lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, beta-propeller domain-like; SPTR: Lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
  
     0.728
ADU47777.1
Hypothetical protein; KEGG: tmt:Tmath_0720 capsule polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Capsule polysaccharide biosynthesis protein.
  
     0.716
ADU50040.1
CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: ooe:OEOE_1430 cell wall hydrolase; PFAM: CHAP domain containing protein; SPTR: Cell wall-associated hydrolase with LysM domains; PFAM: CHAP domain.
  
     0.715
ADU47754.1
KEGG: cfl:Cfla_1002 putative integral membrane protein; SPTR: Putative integral membrane protein.
 
     0.701
ADU47848.1
KEGG: kra:Krad_3756 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3618).
  
     0.699
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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