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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU50116.1Hypothetical protein; InterPro IPR004378; KEGG: bcv:Bcav_0930 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: deazaflavin-dependent nitroreductase family protein. (133 aa)    
Predicted Functional Partners:
ADU50115.1
Metallophosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: rop:ROP_36970 3',5'-cyclic-nucleotide phosphodiesterase; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
       0.532
ADU50101.1
KEGG: mab:MAB_3781 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.522
ADU47309.1
KEGG: ske:Sked_28360 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.408
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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