STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAA97292.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (494 aa)    
Predicted Functional Partners:
OAA97291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
OAB00610.1
Peptidase S53; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
OAB02175.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
OAA97155.1
Peptidase M6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.564
OAA98627.1
Iron-sulfur cluster assembly scaffold protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.559
OAB00396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.530
OAA95545.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
OAA97474.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
pheT
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.499
OAB00400.1
Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
Your Current Organism:
Streptomyces sp. FXJ1172
NCBI taxonomy Id: 710705
Other names: S. sp. FXJ1.172, Streptomyces sp. FXJ1.172
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.