EUGRSUZ_K01775 protein (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUGRSUZ_K01775

Uncharacterized protein. (253 aa)

Predicted Functional Partners:

EUGRSUZ_J03040

0.857

EUGRSUZ_E02846

0.853

EUGRSUZ_F01411

0.847

EUGRSUZ_B03138

0.841

EUGRSUZ_H04416

0.804

EUGRSUZ_F01461

0.797

EUGRSUZ_H00240

0.785

EUGRSUZ_I01295

0.764

EUGRSUZ_G02711

0.761

EUGRSUZ_K03490

0.743

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_B03138	EUGRSUZ_E02846	A0A059D8F0	A0A059C6T9	Uncharacterized protein.	Uncharacterized protein.	0.978
EUGRSUZ_B03138	EUGRSUZ_F01411	A0A059D8F0	A0A059BP46	Uncharacterized protein.	Uncharacterized protein.	0.999
EUGRSUZ_B03138	EUGRSUZ_F01461	A0A059D8F0	A0A059BPA0	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
EUGRSUZ_B03138	EUGRSUZ_G02711	A0A059D8F0	A0A059BHS6	Uncharacterized protein.	RRM domain-containing protein.	0.874
EUGRSUZ_B03138	EUGRSUZ_H00240	A0A059D8F0	A0A059AUZ4	Uncharacterized protein.	RIO domain-containing protein.	0.934
EUGRSUZ_B03138	EUGRSUZ_H04416	A0A059D8F0	A0A059B6Z6	Uncharacterized protein.	Nop domain-containing protein.	0.998
EUGRSUZ_B03138	EUGRSUZ_I01295	A0A059D8F0	A0A059APP8	Uncharacterized protein.	Uncharacterized protein.	0.968
EUGRSUZ_B03138	EUGRSUZ_J03040	A0A059D8F0	A0A059AJC9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
EUGRSUZ_B03138	EUGRSUZ_K01775	A0A059D8F0	A0A059A3W8	Uncharacterized protein.	Uncharacterized protein.	0.841
EUGRSUZ_B03138	EUGRSUZ_K03490	A0A059D8F0	A0A059A893	Uncharacterized protein.	Uncharacterized protein.	0.999
EUGRSUZ_E02846	EUGRSUZ_B03138	A0A059C6T9	A0A059D8F0	Uncharacterized protein.	Uncharacterized protein.	0.978
EUGRSUZ_E02846	EUGRSUZ_F01411	A0A059C6T9	A0A059BP46	Uncharacterized protein.	Uncharacterized protein.	0.999
EUGRSUZ_E02846	EUGRSUZ_F01461	A0A059C6T9	A0A059BPA0	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.772
EUGRSUZ_E02846	EUGRSUZ_G02711	A0A059C6T9	A0A059BHS6	Uncharacterized protein.	RRM domain-containing protein.	0.865
EUGRSUZ_E02846	EUGRSUZ_H00240	A0A059C6T9	A0A059AUZ4	Uncharacterized protein.	RIO domain-containing protein.	0.998
EUGRSUZ_E02846	EUGRSUZ_H04416	A0A059C6T9	A0A059B6Z6	Uncharacterized protein.	Nop domain-containing protein.	0.769
EUGRSUZ_E02846	EUGRSUZ_I01295	A0A059C6T9	A0A059APP8	Uncharacterized protein.	Uncharacterized protein.	0.867
EUGRSUZ_E02846	EUGRSUZ_J03040	A0A059C6T9	A0A059AJC9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
EUGRSUZ_E02846	EUGRSUZ_K01775	A0A059C6T9	A0A059A3W8	Uncharacterized protein.	Uncharacterized protein.	0.853
EUGRSUZ_E02846	EUGRSUZ_K03490	A0A059C6T9	A0A059A893	Uncharacterized protein.	Uncharacterized protein.	0.947