STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_J00097Uncharacterized protein. (418 aa)    
Predicted Functional Partners:
EUGRSUZ_I01159
Uncharacterized protein.
    
 
 0.687
EUGRSUZ_K02800
Uncharacterized protein.
      
 0.602
EUGRSUZ_C00230
Uncharacterized protein.
   
 0.564
EUGRSUZ_I00235
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.529
EUGRSUZ_B01536
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
  
 0.474
EUGRSUZ_J01641
Autophagy protein 5; Required for autophagy.
      
 0.428
EUGRSUZ_F03177
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
      
 0.418
EUGRSUZ_D02369
Uncharacterized protein.
    
 
 0.406
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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