STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_J00222tRNA pseudouridine synthase. (396 aa)    
Predicted Functional Partners:
EUGRSUZ_K03351
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.644
EUGRSUZ_G01370
RPOLD domain-containing protein.
  
  
 0.614
EUGRSUZ_F04451
Ig-like domain-containing protein.
  
  
 0.614
EUGRSUZ_C02146
Uncharacterized protein.
   
 
 0.576
EUGRSUZ_E01030
Uncharacterized protein.
  
   0.561
A0A059B827
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.557
A0A059B9E1
Uncharacterized protein.
  
  
 0.557
EUGRSUZ_A00878
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.557
EUGRSUZ_B04012
Uncharacterized protein.
   
 
 0.541
EUGRSUZ_J03040
WD_REPEATS_REGION domain-containing protein.
   
  
 0.538
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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