STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_H01489RIBOSOMAL_L9 domain-containing protein. (218 aa)    
Predicted Functional Partners:
EUGRSUZ_I00975
Ribosomal_TL5_C domain-containing protein.
  
 
 0.999
A0A059BHC6
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
EUGRSUZ_F02613
Uncharacterized protein.
  
 
 0.999
EUGRSUZ_F03504
Uncharacterized protein.
   
 
 0.999
EUGRSUZ_C02020
Uncharacterized protein.
  
 
 0.995
EUGRSUZ_H01868
Ribosomal_L2_C domain-containing protein.
  
 
 0.994
EUGRSUZ_B03760
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.992
EUGRSUZ_K00287
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.991
EUGRSUZ_J01562
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.991
EUGRSUZ_I02710
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
  
 
 0.991
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.