STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_G02937Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
EUGRSUZ_A01314
Uncharacterized protein.
  
 0.529
EUGRSUZ_A01003
Ribosomal_L7Ae domain-containing protein.
  
  0.516
EUGRSUZ_H04416
Nop domain-containing protein.
   
  0.488
EUGRSUZ_K01904
Uncharacterized protein.
  
 0.486
EUGRSUZ_C03720
Uncharacterized protein.
  
 0.486
EUGRSUZ_E00082
PINc domain-containing protein.
    
  0.477
EUGRSUZ_A02172
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.477
EUGRSUZ_F01461
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.476
EUGRSUZ_J01030
WD_REPEATS_REGION domain-containing protein.
    
  0.472
EUGRSUZ_F02239
WD_REPEATS_REGION domain-containing protein.
    
 0.470
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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