EUGRSUZ_C04213 protein (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUGRSUZ_C04213

Uncharacterized protein. (453 aa)

Predicted Functional Partners:

EUGRSUZ_D02624

0.748

EUGRSUZ_K00087

0.747

EUGRSUZ_J01844

0.746

EUGRSUZ_B03502

0.742

EUGRSUZ_C02284

0.730

EUGRSUZ_J03114

0.727

EUGRSUZ_K01978

0.723

EUGRSUZ_D01635

0.723

EUGRSUZ_D01632

0.723

EUGRSUZ_I01134

0.722

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_B03502	EUGRSUZ_C04213	A0A059D8Z9	A0A059CWU4	Uncharacterized protein.	Uncharacterized protein.	0.742
EUGRSUZ_B03502	EUGRSUZ_D01632	A0A059D8Z9	A0A059CH66	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.761
EUGRSUZ_B03502	EUGRSUZ_D01635	A0A059D8Z9	A0A059CFX3	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.761
EUGRSUZ_B03502	EUGRSUZ_I01134	A0A059D8Z9	A0A059AMV7	Uncharacterized protein.	Uncharacterized protein.	0.774
EUGRSUZ_B03502	EUGRSUZ_J01844	A0A059D8Z9	A0A059AFP4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.974
EUGRSUZ_B03502	EUGRSUZ_J03114	A0A059D8Z9	A0A059AJP9	Uncharacterized protein.	Epimerase domain-containing protein.	0.964
EUGRSUZ_B03502	EUGRSUZ_K01978	A0A059D8Z9	A0A059A4H0	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.761
EUGRSUZ_C02284	EUGRSUZ_C04213	A0A059CRW7	A0A059CWU4	Uncharacterized protein.	Uncharacterized protein.	0.730
EUGRSUZ_C02284	EUGRSUZ_D01632	A0A059CRW7	A0A059CH66	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.757
EUGRSUZ_C02284	EUGRSUZ_D01635	A0A059CRW7	A0A059CFX3	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.757
EUGRSUZ_C02284	EUGRSUZ_I01134	A0A059CRW7	A0A059AMV7	Uncharacterized protein.	Uncharacterized protein.	0.796
EUGRSUZ_C02284	EUGRSUZ_J01844	A0A059CRW7	A0A059AFP4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.965
EUGRSUZ_C02284	EUGRSUZ_J03114	A0A059CRW7	A0A059AJP9	Uncharacterized protein.	Epimerase domain-containing protein.	0.962
EUGRSUZ_C02284	EUGRSUZ_K01978	A0A059CRW7	A0A059A4H0	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.757
EUGRSUZ_C04213	EUGRSUZ_B03502	A0A059CWU4	A0A059D8Z9	Uncharacterized protein.	Uncharacterized protein.	0.742
EUGRSUZ_C04213	EUGRSUZ_C02284	A0A059CWU4	A0A059CRW7	Uncharacterized protein.	Uncharacterized protein.	0.730
EUGRSUZ_C04213	EUGRSUZ_D01632	A0A059CWU4	A0A059CH66	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.723
EUGRSUZ_C04213	EUGRSUZ_D01635	A0A059CWU4	A0A059CFX3	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.	0.723
EUGRSUZ_C04213	EUGRSUZ_D02624	A0A059CWU4	A0A059CJ66	Uncharacterized protein.	Uncharacterized protein.	0.748
EUGRSUZ_C04213	EUGRSUZ_I01134	A0A059CWU4	A0A059AMV7	Uncharacterized protein.	Uncharacterized protein.	0.722