STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_B00663Str_synth domain-containing protein. (270 aa)    
Predicted Functional Partners:
EUGRSUZ_J01952
Uncharacterized protein.
  
 
 0.578
EUGRSUZ_J00205
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 
 0.493
EUGRSUZ_F03766
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
 
 0.493
EUGRSUZ_A01270
RNB domain-containing protein.
   
 
 0.493
EUGRSUZ_F00474
Cyclin_C domain-containing protein.
  
     0.491
A0A059BHC6
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
    0.485
EUGRSUZ_A01124
HRDC domain-containing protein.
   
 
 0.478
EUGRSUZ_A02131
HRDC domain-containing protein.
   
 
 0.478
EUGRSUZ_F03504
Uncharacterized protein.
  
  
 0.473
EUGRSUZ_G01370
RPOLD domain-containing protein.
   
  
 0.470
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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