ALD00512.1 protein (Actinomyces) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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[Homology]

Score

ALD00512.1

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)

Predicted Functional Partners:

ALC98622.1

0.992

ALC98623.1

0.923

ALC98786.1

0.915

ALD00521.1

0.912

ALC99514.1

0.912

ALC99650.1

0.892

ALC99830.1

0.863

ALC98624.1

0.828

ALC98369.1

0.826

ALC98784.1

0.826

Your Current Organism:

Actinomyces

NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC98369.1	ALC98784.1	AM609_00730	AM609_03520	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
ALC98369.1	ALC98786.1	AM609_00730	AM609_03530	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.993
ALC98369.1	ALC99650.1	AM609_00730	AM609_09465	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
ALC98369.1	ALC99830.1	AM609_00730	AM609_10780	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
ALC98369.1	ALD00512.1	AM609_00730	AM609_02435	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
ALC98622.1	ALC98623.1	AM609_02440	AM609_02445	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ALC98622.1	ALC98624.1	AM609_02440	AM609_02450	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
ALC98622.1	ALC98784.1	AM609_02440	AM609_03520	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
ALC98622.1	ALC99514.1	AM609_02440	AM609_08520	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ALC98622.1	ALC99650.1	AM609_02440	AM609_09465	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
ALC98622.1	ALC99830.1	AM609_02440	AM609_10780	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
ALC98622.1	ALD00512.1	AM609_02440	AM609_02435	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
ALC98622.1	ALD00521.1	AM609_02440	AM609_02715	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
ALC98623.1	ALC98622.1	AM609_02445	AM609_02440	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ALC98623.1	ALC98624.1	AM609_02445	AM609_02450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
ALC98623.1	ALC99514.1	AM609_02445	AM609_08520	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
ALC98623.1	ALC99650.1	AM609_02445	AM609_09465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
ALC98623.1	ALD00512.1	AM609_02445	AM609_02435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ALC98623.1	ALD00521.1	AM609_02445	AM609_02715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
ALC98624.1	ALC98622.1	AM609_02450	AM609_02440	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851