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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC98624.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
ALC98623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.878
ALC98622.1
Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.851
ALD00512.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
ALC98661.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.687
ALD00607.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
ALD00521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.649
ALC99514.1
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.639
ALD00670.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.623
ALC98662.1
Cobalt ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.584
ALC98618.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
  
 0.564
Your Current Organism:
Actinomyces
NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414
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