STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC98715.1Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
ALC98714.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
ALC98716.1
Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.995
ALD00105.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.951
ALD00237.1
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
ALD00532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.931
ALC98718.1
Peptidase T4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
ALD00104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.912
ALD00236.1
Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.906
ALD00834.1
Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
ALC98717.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.895
Your Current Organism:
Actinomyces
NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.