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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC98925.1Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
ALC98924.1
Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
ALC98926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.938
ALC98927.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.900
ALD00560.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.897
ALC98928.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.886
ALC98726.1
Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
ALC98725.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.780
ALD00561.1
FMN-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
ALD00559.1
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.534
ALC98268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
    0.522
Your Current Organism:
Actinomyces
NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414
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