STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC98928.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)    
Predicted Functional Partners:
ALD00560.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.973
ALC98927.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.969
ALC98926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.947
ALD00059.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.910
ALD00262.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.876
ALD00263.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.872
ALC98925.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.866
ALC98726.1
Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.844
ALC98924.1
Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.843
ALC98725.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.826
Your Current Organism:
Actinomyces
NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414
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