| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALC98389.1 | ALC98595.1 | AM609_00880 | AM609_02270 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| ALC98389.1 | ALC98849.1 | AM609_00880 | AM609_03915 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| ALC98389.1 | ALC99068.1 | AM609_00880 | AM609_05515 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.969 |
| ALC98389.1 | ALD00292.1 | AM609_00880 | AM609_14200 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.977 |
| ALC98389.1 | dinB | AM609_00880 | AM609_03805 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.585 |
| ALC98389.1 | lexA | AM609_00880 | AM609_04555 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.675 |
| ALC98389.1 | ruvA | AM609_00880 | AM609_07155 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.567 |
| ALC98389.1 | ruvB | AM609_00880 | AM609_07150 | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.885 |
| ALC98595.1 | ALC98389.1 | AM609_02270 | AM609_00880 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| ALC98595.1 | ALC98849.1 | AM609_02270 | AM609_03915 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| ALC98595.1 | ALC99068.1 | AM609_02270 | AM609_05515 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.966 |
| ALC98595.1 | ALC99416.1 | AM609_02270 | AM609_07800 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. | 0.542 |
| ALC98595.1 | ALD00292.1 | AM609_02270 | AM609_14200 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.977 |
| ALC98595.1 | dinB | AM609_02270 | AM609_03805 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.585 |
| ALC98595.1 | lexA | AM609_02270 | AM609_04555 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.675 |
| ALC98595.1 | ruvA | AM609_02270 | AM609_07155 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.567 |
| ALC98595.1 | ruvB | AM609_02270 | AM609_07150 | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.885 |
| ALC98849.1 | ALC98389.1 | AM609_03915 | AM609_00880 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| ALC98849.1 | ALC98595.1 | AM609_03915 | AM609_02270 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| ALC98849.1 | ALC99068.1 | AM609_03915 | AM609_05515 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.969 |
