STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC98943.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)    
Predicted Functional Partners:
ALD00721.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.700
ALC99723.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.697
ALD00152.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
ALC98942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.655
ALC98698.1
Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.528
ALC98762.1
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.521
ALC99133.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.516
ALD00333.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.516
ALC98349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.486
ALC98513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.486
Your Current Organism:
Actinomyces
NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.