STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC99760.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
ALD00729.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
ALC99759.1
PhoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
ALD00489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
ALC99932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
ALD00488.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
ALC98851.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
ALC99098.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
ALC99007.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
ALC99929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
ALC99492.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.544
Your Current Organism:
Actinomyces
NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.