ALC99928.1 protein (Actinomyces) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene co-occurrence

gene fusions

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[Homology]

Score

ALC99928.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)

Predicted Functional Partners:

ALC99929.1

0.946

ALC99934.1

0.779

ALC98851.1

0.774

ALC99932.1

0.774

ALC99896.1

0.771

ALD00489.1

0.770

ALD00500.1

0.765

ALC99841.1

0.764

ALC98610.1

0.754

ALC98609.1

0.751

Your Current Organism:

Actinomyces

NCBI taxonomy Id: 712122
Other names: A. sp. oral taxon 414, Actinomyces sp. oral taxon 414

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC98609.1	ALC98610.1	AM609_02360	AM609_02365	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
ALC98609.1	ALC98851.1	AM609_02360	AM609_03925	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ALC98609.1	ALC99841.1	AM609_02360	AM609_10880	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ALC98609.1	ALC99896.1	AM609_02360	AM609_11250	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.571
ALC98609.1	ALC99928.1	AM609_02360	AM609_11490	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ALC98609.1	ALC99929.1	AM609_02360	AM609_11495	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ALC98609.1	ALC99932.1	AM609_02360	AM609_11530	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
ALC98609.1	ALC99934.1	AM609_02360	AM609_11565	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
ALC98609.1	ALD00489.1	AM609_02360	AM609_01345	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
ALC98610.1	ALC98609.1	AM609_02365	AM609_02360	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
ALC98610.1	ALC98851.1	AM609_02365	AM609_03925	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ALC98610.1	ALC99841.1	AM609_02365	AM609_10880	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ALC98610.1	ALC99896.1	AM609_02365	AM609_11250	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
ALC98610.1	ALC99928.1	AM609_02365	AM609_11490	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ALC98610.1	ALC99929.1	AM609_02365	AM609_11495	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
ALC98610.1	ALC99932.1	AM609_02365	AM609_11530	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ALC98610.1	ALC99934.1	AM609_02365	AM609_11565	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
ALC98610.1	ALD00489.1	AM609_02365	AM609_01345	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
ALC98851.1	ALC98609.1	AM609_03925	AM609_02360	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
ALC98851.1	ALC98610.1	AM609_03925	AM609_02365	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754