Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR69626.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)    
Predicted Functional Partners:
ANR69625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
ANR71783.1
Chemotaxis protein CheX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
ANR71885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
ANR71824.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.737
ANR71215.1
Flagellar hook-length control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
AXF19_01220
Dihydroxyacetone kinase subunit L; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.668
ANR69624.1
Flavodoxin; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
ANR70487.1
Flagellar hook-associated protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.655
ANR71893.1
Flagellar protein FlbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
AXF19_07200
RNA polymerase subunit sigma; Involved in the initiation of sporulation and glycogen biosynthesis; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.551
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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