Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANR69736.1Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
ANR69734.1
Prepilin-type cleavage/methylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.861
ANR69738.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.819
ANR71829.1
Pilus assembly protein PilO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.817
ANR69737.1
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase A24 family.
     
 0.815
ANR69732.1
Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.813
ANR69733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
ANR69735.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.777
ANR69739.1
Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.704
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.630
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.563
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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