Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR69783.1Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
ANR69782.1
Putative heme utilization radical SAM enzyme HutW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
ANR71572.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.745
ANR71563.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.708
AXF19_01390
Biopolymer transporter ExbB; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.525
ANR70622.1
ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.520
ANR70935.1
Receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.507
ANR70784.1
CheY-P-specific phosphatase CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.452
ANR71132.1
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
     0.435
ANR69784.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0251 family.
     
 0.400
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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