Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AXF19_01495Methyltransferase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
ANR71834.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.907
ANR69798.1
Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.797
ANR69699.1
Toxin-antitoxin system antitoxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.754
AXF19_01995
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.684
ANR70307.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.684
ANR71835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.672
ANR70092.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.615
ANR71655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.615
ANR70736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.614
ANR71647.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.614
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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