Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANR69825.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)    
Predicted Functional Partners:
ANR69824.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
ANR69826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.964
ANR71746.1
GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
macB
Macrolide ABC transporter ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.840
ANR71749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.820
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 0.797
ANR69822.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.797
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
 0.797
ANR71745.1
FMN-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
ANR71748.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.772
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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