Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANR69847.1LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)    
Predicted Functional Partners:
ANR70611.1
LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
ANR70609.1
LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
ANR69926.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
ANR69845.1
Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
ANR69846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
ANR69775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MlaE permease family.
  
  
 0.868
ANR70610.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.841
ANR69710.1
Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.837
ANR70967.1
Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.832
ANR71632.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.828
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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