Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANR69871.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
ANR69870.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
ANR69872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
ANR70588.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
ANR70246.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.684
ANR71329.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.679
ANR71200.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.664
AXF19_05860
Exopolysaccharide biosynthesis protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
  
 0.659
ANR69873.1
Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
ANR71192.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.630
ANR71916.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.630
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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