Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AXF19_02170Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (301 aa)    
Predicted Functional Partners:
ANR69918.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.845
hldD
ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
 
     0.778
ANR70107.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
ANR69920.1
D,D-heptose 1,7-bisphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
ANR69919.1
Beta-1,4-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
ANR71839.1
Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
ANR69922.1
Heptose 1-phosphate adenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
ANR69926.1
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.651
ANR69883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.609
ANR70674.1
Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.604
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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