Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR70038.1Toxin YoeB; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)    
Predicted Functional Partners:
ANR70307.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 0.945
AXF19_02885
Filamentation induced by cAMP protein fic; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ANR69699.1
Toxin-antitoxin system antitoxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.736
AXF19_01995
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 0.736
ANR71835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.617
ANR71834.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.611
ANR70092.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.554
ANR70736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.554
ANR71647.1
Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.554
ANR71655.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
  0.554
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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