Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANR70075.1DUF4178 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)    
Predicted Functional Partners:
ANR70073.1
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
ANR70074.1
Branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
ANR70076.1
DUF4178 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.437
AXF19_03080
Addiction module toxin RelE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.400
ANR70072.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.400
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 712528
Other names: S. sp. oral taxon 126, Selenomonas sp. oral taxon 126
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